Noga Aharony

Noga Aharony

PhD Student in Systems Biology

Columbia University Medical Campus

Biography

I am a third-year PhD candidate in at the AQLab, located in the Program for Mathematical Genomics at Columbia University. My research focuses on constructing a foundational, whole-genome language model that can be generalized to all living things, and which could aid the decoding and engineering of organisms, and especially microbes. My background is in biology and especially systems microbiology, and over time I became increasingly fascinated with how to adapt machine learning in a “biologically-aware” manner to get the most out of living systems.

I am a recipient of the Open Philanthropy Project Early Career Funding. As a Master’s student at the Kishony Lab at the Technion, I received the prestigious Gutwirth Memorial Fellowship for Excellence in Research for harnessing novel genomic approaches and big data to investigate how bacterial pathogens evolve upon recurring infections.

I have also occasionally been active in the science and society space, and especially in pandemic preparedness, where I have been involved since 2018.

Interests
  • Large languagde models
  • Genomics
Education
  • PhD in Systems Biology, Ongoing

    Columbia University

  • MSc in Biology, 2021

    Technion - Israel Institute of Technology

  • BSc in Neuroscience, 2019

    McGill University

Publications

(2022). Managing the Transition to Widespread Metagenomic Monitoring: Policy Considerations for Future Biosurveillance. SSRN Preprint.

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(2021). Community-Level Evidence for SARS-CoV-2 Vaccine Protection of Unvaccinated Individuals. Nature Medicine.

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(2020). Evaluation of COVID-19 RT-qPCR Test in Multi-Sample Pools. Clinical Infectious Diseases.

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(2019). Adeno-Associated Viral Vectors for Homology-Directed Generation of CAR-T Cells. Biotechnology Journal.

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